CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
LOC_Os01g60980
(
Oryza sativa
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
LOC_Os01g60980
T10842_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LOC_Os01g60980.1
CCHC ZF
639
656
RLCFNCFEPGHFADKCPK
Links
Other
CCHC ZF
family RBPs
Other
Oryza sativa
RBPs
599 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMEUG00000014575
Macropus eugenii
ENSMEUG00000014575
N
0.000
hnrnph1
Danio rerio
ENSDARG00000040881
N
0.000
HNRNPH1
Homo sapiens
ENSG00000169045
I
0.000
HNRNPH1
Tupaia belangeri
ENSTBEG00000012210
N
0.000
HNRNPH2
Erinaceus europaeus
ENSEEUG00000015697
N
0.000