LOC_Os02g18340 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os02g18340 T10893_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os02g18340.1 CCHC ZF 438 455

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

612 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.000
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.000
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.000
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.000
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.000
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.000
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.000
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.000
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.000
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.000
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.000
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.000
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.000
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.000
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.000
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.000
ENSRNOG00000032616 Rattus norvegicus ENSRNOG00000032616 I 0.000
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.000
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.000
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.000
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.000
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.000
HNRNPA1 Homo sapiens ENSG00000135486 D 0.000
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.000
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.000
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.000
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.000
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.000
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.000
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.000
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.000
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.000
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.000
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.000