CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
LOC_Os02g25180
(
Oryza sativa
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
LOC_Os02g25180
T10916_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LOC_Os02g25180.1
CCHC ZF
531
548
GVCFNCGEPGHYSDKCPK
Links
Other
CCHC ZF
family RBPs
Other
Oryza sativa
RBPs
612 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A7TL20_VANPO
Vanderwaltozyma polyspora
A7TL20_VANPO
N
0.000
AAR151W
Ashbya gossypii
AAR151W
N
0.000
KLLA0C05522g
Kluyveromyces lactis
KLLA0C05522g
N
0.000
KLTH0H06842g
Kluyveromyces thermotolerans
KLTH0H06842g
N
0.000
Kwal_1851
Kluyveromyces waltii
Kwal_1851
N
0.000