LOC_Os03g36290 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os03g36290 T11063_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os03g36290.1 CCHC ZF 424 441

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s15430g1t1 Acyrtosiphon pisum DGIL_AUG5s15430g1t1 N 0.000
fgenesh1_pg.C_scaffold_1459000002 Capitella teleta fgenesh1_pg.C_scaffold_1459000002 N 0.000
SPPG_00438 Spizellomyces punctatus SPPG_00438 N 0.000
SPPG_01770 Spizellomyces punctatus SPPG_01770 N 0.000
SPPG_03316 Spizellomyces punctatus SPPG_03316 N 0.000
SPPG_03725 Spizellomyces punctatus SPPG_03725 N 0.000
SPPG_03727 Spizellomyces punctatus SPPG_03727 N 0.000
SPPG_06303 Spizellomyces punctatus SPPG_06303 N 0.000
SPPG_08024 Spizellomyces punctatus SPPG_08024 N 0.000
SPPG_08320 Spizellomyces punctatus SPPG_08320 N 0.000
SPPG_08560 Spizellomyces punctatus SPPG_08560 N 0.000
SPPG_08561 Spizellomyces punctatus SPPG_08561 N 0.000
SPPG_08805 Spizellomyces punctatus SPPG_08805 N 0.000
SPPG_08808 Spizellomyces punctatus SPPG_08808 N 0.000
XP_001191181.1 Strongylocentrotus purpuratus XP_001191181.1 N 0.000