LOC_Os07g41530 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os07g41530 T11877_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os07g41530.1 CCHC ZF 356 373

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29706.m001348 Ricinus communis 29706.m001348 N 0.000
AT1G17640 Arabidopsis thaliana AT1G17640-TAIR-G N 0.000
B9MWT9_POPTR Populus trichocarpa POPTR_0003s04340 N 0.000
B9N2X8_POPTR Populus trichocarpa POPTR_0001s20310 N 0.000
BGIOSIBCE006177 Oryza indica BGIOSIBCE006177 N 0.000
BGIOSIBCE022335 Oryza indica BGIOSIBCE022335 N 0.000
BRADI1G37692 Brachypodium distachyon BRADI1G37692 N 0.000
cassava179.valid.m1 Manihot esculenta cassava179.valid.m1 N 0.000
Cucsa.360490 Cucumis sativus Cucsa.360490 N 0.000
GRMZM2G139090 Zea mays GRMZM2G139090 N 0.000
GRMZM2G139643 Zea mays GRMZM2G139643 N 0.000
GRMZM2G167356 Zea mays GRMZM2G167356 N 0.000
GRMZM2G550472 Zea mays GRMZM2G550472 N 0.000
LOC_Os02g12850 Oryza sativa LOC_Os02g12850 N 0.000
MDP0000158246 Malus x domestica MDP0000158246 N 0.000
ppa006895m Prunus persica ppa006895m N 0.000
SB04G007860 Sorghum bicolor Sb04g007860 N 0.000
SB10G022380 Sorghum bicolor Sb10g022380 N 0.000