LOC_Os09g13140 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os09g13140 T12115_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os09g13140.1 CCHC ZF 132 148
LOC_Os09g13140.1 CCHC ZF 304 321
LOC_Os09g13140.1 CCHC ZF 340 356

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCJAG00000011942 Callithrix jacchus ENSCJAG00000011942 N 0.000
ENSGGOG00000011507 Gorilla gorilla ENSGGOG00000011507 N 0.000
Q5ZKS1_CHICK Gallus gallus ENSGALG00000009677 N 0.000
SSB Echinops telfairi ENSETEG00000004614 N 0.000
SSB Homo sapiens ENSG00000138385 N 0.000
SSB Erinaceus europaeus ENSEEUG00000008077 N 0.000
Ssb Dipodomys ordii ENSDORG00000005543 N 0.000
SSB Myotis lucifugus ENSMLUG00000016316 N 0.000
Ssb Mus musculus ENSMUSG00000068882 N 0.000
SSB Spermophilus tridecemlineatus ENSSTOG00000008416 N 0.000