CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Genemark.12016_g
(
Serpula lacrymans
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Genemark.12016_g
T15684_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Genemark.12016_g
CCHC ZF
227
244
FTCFSCGQEGHMAQDCTN
Links
Other
CCHC ZF
family RBPs
Other
Serpula lacrymans
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CG4612
Drosophila melanogaster
FBgn0035016
N
0.000
GA18301-RA
Drosophila pseudoobscura
FBgn0078306
N
0.000
GD24944
Drosophila simulans
FBgn0196258
N
0.000
GE11444
Drosophila yakuba
FBgn0229249
N
0.000
GF11244
Drosophila ananassae
FBgn0088284
N
0.000
GH22019
Drosophila grimshawi
FBgn0129480
N
0.000
GI19109
Drosophila mojavensis
FBgn0141848
N
0.000
GJ22239
Drosophila virilis
FBgn0209352
N
0.000
GK19472
Drosophila willistoni
FBgn0221470
N
0.000
GL20391
Drosophila persimilis
FBgn0157986
N
0.000
GM11822
Drosophila sechellia
FBgn0166764
N
0.000