CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP2
(
Taeniopygia guttata
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSTGUG00000002098
T22863_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000002165
La
158
215
IKHQIEYYFSTENLERDFFLRRKMDQQGFLPVSLIASFRRMQALTTNAALILEALKDS
Links
Other
La
family RBPs
Other
Taeniopygia guttata
RBPs
79 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH93491
Xenopus laevis
AAH93491
N
0.741
AAH98998
Xenopus laevis
AAH98998
N
0.724
AAI34816
Xenopus laevis
AAI34816
N
0.776
Ame_R005086
Ailuropoda melanoleuca
Ame_R005086
N
0.759
Ame_R010453
Ailuropoda melanoleuca
Ame_R010453
N
0.845
ENSDORG00000013445
Dipodomys ordii
ENSDORG00000013445
N
0.741
ENSGGOG00000006048
Gorilla gorilla
ENSGGOG00000006048
N
0.759
ENSGGOG00000024102
Gorilla gorilla
ENSGGOG00000024102
N
0.759
ENSLAFG00000008473
Loxodonta africana
ENSLAFG00000008473
N
0.845
LARP1
Tarsius syrichta
ENSTSYG00000013732
N
0.776
LARP1
Ornithorhynchus anatinus
ENSOANG00000005096
N
0.759
Larp1
Mus musculus
ENSMUSG00000037331
N
0.759
LARP1
Ochotona princeps
ENSOPRG00000013014
N
0.759
LARP1
Monodelphis domestica
ENSMODG00000008663
N
0.741
LARP1
Macaca mulatta
ENSMMUG00000009411
N
0.759
LARP1
Myotis lucifugus
ENSMLUG00000002608
N
0.759
LARP1
Microcebus murinus
ENSMICG00000000837
N
0.759
LARP1
Oryctolagus cuniculus
ENSOCUG00000013066
N
0.759
LARP1
Otolemur garnettii
ENSOGAG00000016750
N
0.759
LARP1
Takifugu rubripes
ENSTRUG00000009470
N
0.828
LARP1
Taeniopygia guttata
ENSTGUG00000000704
N
0.759
LARP1
Spermophilus tridecemlineatus
ENSSTOG00000005678
N
0.759
LARP1
Tursiops truncatus
ENSTTRG00000015934
N
0.759
Larp1
Rattus norvegicus
ENSRNOG00000031544
N
0.759
LARP1
Pteropus vampyrus
ENSPVAG00000002262
N
0.759
LARP1
Pan troglodytes
ENSPTRG00000017447
N
0.759
LARP1
Procavia capensis
ENSPCAG00000006407
N
0.759
larp1
Xenopus tropicalis
ENSXETG00000008413
N
0.759
LARP1
Oryzias latipes
ENSORLG00000000824
N
0.828
LARP1
Meleagris gallopavo
ENSMGAG00000005696
N
0.759
LARP1
Macropus eugenii
ENSMEUG00000002957
N
0.741
LARP1
Sus scrofa
ENSSSCG00000017069
N
0.759
Larp1
Dipodomys ordii
ENSDORG00000002897
N
0.759
LARP1
Canis familiaris
ENSCAFG00000017639
N
0.759
LARP1
Equus caballus
ENSECAG00000017002
N
0.759
LARP1
Echinops telfairi
ENSETEG00000020251
N
0.759
LARP1
Felis catus
ENSFCAG00000000592
N
0.759
LARP1
Bos taurus
ENSBTAG00000008443
N
0.759
LARP1
Homo sapiens
ENSG00000155506
N
0.759
LARP1
Dasypus novemcinctus
ENSDNOG00000012073
N
0.759
LARP1
Cavia porcellus
ENSCPOG00000003377
N
0.759
LARP1
Loxodonta africana
ENSLAFG00000008991
N
0.759
LARP1
Anolis carolinensis
ENSACAG00000004071
N
0.759
larp1
Danio rerio
ENSDARG00000018434
N
0.793
LARP1
Gallus gallus
ENSGALG00000004001
N
0.759
LARP1B
Takifugu rubripes
ENSTRUG00000005612
N
0.759
LARP1B
Tetraodon nigroviridis
ENSTNIG00000012398
N
0.776
LARP1B
Callithrix jacchus
ENSCJAG00000003338
N
0.828
LARP1B
Tupaia belangeri
ENSTBEG00000004177
N
0.776
LARP1B
Tursiops truncatus
ENSTTRG00000012984
N
0.845
LARP1B
Choloepus hoffmanni
ENSCHOG00000005354
N
0.828
LARP1B
Tarsius syrichta
ENSTSYG00000002037
N
0.845
LARP1B
Canis familiaris
ENSCAFG00000003831
N
0.845
LARP1B
Vicugna pacos
ENSVPAG00000007223
N
0.845
LARP1B
Bos taurus
ENSBTAG00000012135
N
0.845
larp1b
Xenopus tropicalis
ENSXETG00000022512
N
0.759
LARP1B
Anolis carolinensis
ENSACAG00000011338
N
0.862
LARP1B
Echinops telfairi
ENSETEG00000012497
N
0.759
LARP1B
Sus scrofa
ENSSSCG00000009073
N
0.845
Larp1b
Rattus norvegicus
ENSRNOG00000038366
N
0.845
LARP1B
Myotis lucifugus
ENSMLUG00000010229
N
0.845
LARP1B
Gasterosteus aculeatus
ENSGACG00000004609
N
0.810
LARP1B
Homo sapiens
ENSG00000138709
N
0.828
Larp1b
Mus musculus
ENSMUSG00000037814
N
0.862
LARP1B
Oryctolagus cuniculus
ENSOCUG00000013330
N
0.845
LARP1B
Otolemur garnettii
ENSOGAG00000005771
N
0.845
LARP1B
Meleagris gallopavo
ENSMGAG00000004809
N
0.845
LARP1B
Ochotona princeps
ENSOPRG00000005478
N
0.828
LARP1B
Monodelphis domestica
ENSMODG00000012300
N
0.862
LARP1B
Pteropus vampyrus
ENSPVAG00000005373
N
0.862
LARP1B
Macaca mulatta
ENSMMUG00000021347
N
0.828
LARP1B
Dasypus novemcinctus
ENSDNOG00000018765
N
0.845
LARP1B
Procavia capensis
ENSPCAG00000007546
N
0.810
LARP1B
Oryzias latipes
ENSORLG00000017954
N
0.776
LARP2
Gallus gallus
ENSGALG00000010207
N
0.897
LOC100071865
Equus caballus
ENSECAG00000001088
N
0.845
LOC100393482
Callithrix jacchus
ENSCJAG00000004454
N
0.759
LOC742664
Pan troglodytes
ENSPTRG00000016437
N
0.828
nasonia_NCBI_hmm577234
Nasonia vitripennis
nasonia_NCBI_hmm577234
N
0.741