CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Anolis carolinensis
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSACAG00000004118
T26269_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000004070
RanBP ZF
494
522
SSYWKCNTCPIENKPTDNKCIACQAAKVP
ENSACAP00000004070
RanBP ZF
559
587
AGTWDCDTCLVQNKPESTKCVACETPKLG
ENSACAP00000004070
RanBP ZF
629
658
PEGAWECSVCLVSNNAESSKCVACQSDKPG
ENSACAP00000004070
RanBP ZF
687
716
PEGSWDCETCLVQNKADATKCVACETAKPG
Links
Other
RanBP ZF
family RBPs
Other
Anolis carolinensis
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AMAG_07791
Allomyces macrogynus
AMAG_07791
N
0.000
AMAG_13984
Allomyces macrogynus
AMAG_13984
N
0.000