CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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VDBG_00824
(
Verticillium albo atrum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
VDBG_00824
T31439_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_00824T0
RRM
219
289
LRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFVDRSDAVKACAKMDGFGFKHLILR
Links
Other
RRM
family RBPs
Other
Verticillium albo atrum
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TcIL3000.0.12870
Trypanosoma congolense
TcIL3000.0.12870
N
0.000
TcIL3000.0.47510
Trypanosoma congolense
TcIL3000.0.47510
N
0.000