CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF2
(
Canis familiaris
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCAFG00000004973
T35016_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000007426
RRM
60
131
MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMH
ENSCAFP00000007426
RRM
152
220
LFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCS
ENSCAFP00000007426
RRM
449
519
LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Canis familiaris
RBPs
93 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC_Os04g03110
Oryza sativa
LOC_Os04g03110
N
0.000
LOC_Os05g17150
Oryza sativa
LOC_Os05g17150
N
0.000
LOC_Os06g32820
Oryza sativa
LOC_Os06g32820
N
0.000
LOC_Os10g09490
Oryza sativa
LOC_Os10g09490
N
0.000
LOC_Os11g22910
Oryza sativa
LOC_Os11g22910
N
0.000
LOC_Os12g25220
Oryza sativa
LOC_Os12g25220
N
0.000