LOC100396934 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000007960 T35545_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPN1
M148_0.6 		Homo sapiens ARAAGA RNAcompete
Ray et al.(2013)
RNCMPT00157 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000014751 RRM 132 201
ENSCJAP00000014752 RRM 174 243

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

114 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G28315 Arabidopsis thaliana AT3G28315-TAIR-G N 0.000
AT3G60170 Arabidopsis thaliana AT3G60170-TAIR-G N 0.000
AT5G45116 Arabidopsis thaliana AT5G45116-TAIR-G N 0.000
BGIBMGA012989 Bombyx mori BGIBMGA012989 N 0.000
GSVIVG00028612001 Vitis vinifera GSVIVG00028612001 N 0.000
PMAA_015550 Penicillium marneffei PMAA_015550 N 0.000