CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Hnrnpab
(
Dipodomys ordii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDORG00000011015
T36503_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000010357
RRM
75
144
MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID
ENSDORP00000010357
RRM
159
182
IFVGGLNPEATEEKIREYFGEXXX
Links
Other
RRM
family RBPs
Other
Dipodomys ordii
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSETEG00000004998
Echinops telfairi
ENSETEG00000004998
N
0.938
HNRNPD
Dasypus novemcinctus
ENSDNOG00000013830
N
0.707
HNRNPD
Homo sapiens
ENSG00000138668
I
0.714