CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM12B
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000011985
T38427_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000012575
RRM
7
70
LQGLPVVAGPADIRRFFLGLNIPDGGVHIIGGEIGEAFIIFATDEDARRAMSCSGGFIKDSRIE
ENSMGAP00000012575
RRM
176
243
LFLRGIPYSATEDAVRDFLSGIRVDGVILIKHRNGLNNGNCLVKFATPGDALEGLKRHRQYMGQRFIE
ENSMGAP00000012575
RRM
309
378
IHLRNLSTNVEKRDLREFFPDLDISNKQIKILSEKHQRRTRDAFVMLRNERDYQAALECHRKVLLNRSVY
ENSMGAP00000012575
RRM
425
494
AYVRNFPFDVTKVEVRRFFERFDIDEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAENLNHQRYLGTEVL
ENSMGAP00000012575
RRM
588
658
IRLKNLPFKATPNEILDFFYGYRVIPESVSVQYNEQGLPSGDAIVAMTNYEEAMTAINELNDRPIGPRKVK
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM12B
Monodelphis domestica
ENSMODG00000007436
N
0.733