CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MKI67IP
(
Takifugu rubripes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTRUG00000005206
T42230_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000012509
RRM
50
120
IYVGHLPRGLFEPQLKAYFEQFGKVLRLRLSRSKKTGKSKGYAFIEFDCDDVAKIVAETMNNYLMGERLIK
ENSTRUP00000012510
RRM
44
114
IYVGHLPRGLFEPQLKAYFEQFGKVLRLRLSRSKKTGKSKGYAFIEFDCDDVAKIVAETMNNYLMGERLIK
ENSTRUP00000012511
RRM
44
114
IYVGHLPRGLFEPQLKAYFEQFGKVLRLRLSRSKKTGKSKGYAFIEFDCDDVAKIVAETMNNYLMGERLIK
Links
Other
RRM
family RBPs
Other
Takifugu rubripes
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R009999
Ailuropoda melanoleuca
Ame_R009999
N
0.732
ENSMODG00000008447
Monodelphis domestica
ENSMODG00000008447
N
0.732
ENSPPYG00000025875
Pongo pygmaeus
ENSPPYG00000025875
N
0.704
LOC100055172
Equus caballus
ENSECAG00000018478
N
0.761
LOC100386303
Callithrix jacchus
ENSCJAG00000013386
N
0.704
MK67I_BOVIN
Bos taurus
ENSBTAG00000019387
N
0.732
MKI67IP
Tursiops truncatus
ENSTTRG00000005849
N
0.718
MKI67IP
Vicugna pacos
ENSVPAG00000005847
N
0.732
MKI67IP
Tetraodon nigroviridis
ENSTNIG00000017831
N
0.958
MKI67IP
Pteropus vampyrus
ENSPVAG00000016707
N
0.732
mki67ip
Xenopus tropicalis
ENSXETG00000000839
N
0.746
MKI67IP
Oryzias latipes
ENSORLG00000018551
N
0.831
MKI67IP
Otolemur garnettii
ENSOGAG00000016968
N
0.746
MKI67IP
Ornithorhynchus anatinus
ENSOANG00000007522
N
0.704
MKI67IP
Felis catus
ENSFCAG00000010787
N
0.732
MKI67IP
Cavia porcellus
ENSCPOG00000007472
N
0.718
mki67ip
Danio rerio
ENSDARG00000040666
N
0.873
MKI67IP
Erinaceus europaeus
ENSEEUG00000008535
N
0.732
MKI67IP
Canis familiaris
ENSCAFG00000004710
N
0.718
MKI67IP
Gasterosteus aculeatus
ENSGACG00000001551
N
0.873
MKI67IP
Gallus gallus
ENSGALG00000011650
N
0.817
MKI67IP
Loxodonta africana
ENSLAFG00000030731
N
0.831
MKI67IP
Meleagris gallopavo
ENSMGAG00000011953
N
0.831
MKI67IP
Microcebus murinus
ENSMICG00000015787
N
0.704
MKI67IP
Macaca mulatta
ENSMMUG00000020928
N
0.704
MKI67IP
Choloepus hoffmanni
ENSCHOG00000002227
N
0.831
Q7SYS2
Xenopus laevis
Q7SYS2
N
0.718
XM_001364715.1
Monodelphis domestica
ENSMODG00000000152
N
0.775