CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP2
(
Takifugu rubripes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTRUG00000007941
T42266_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000019774
RRM
226
295
IRARGLPWQSSDQDIARFFKGLTIAKGGVALCLNAQGRRNGEALVRFINPEHRDLALERHKHHMGNRYIE
ENSTRUP00000019774
RRM
327
399
IRMRGLPFTATPQEVLSFIGPESPVTDGAEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKQILGKRYIE
ENSTRUP00000019774
RRM
451
523
VRLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQLKSPDKAFLVAQKCHKKTMKDRYVE
ENSTRUP00000019774
RRM
665
735
VRMQGLPYNTGVKDILSFFQGYQLQPDAVLILYNFSGQCSGEALITFPSEEMAKQAVAERSNHTFYGQQVH
ENSTRUP00000019775
RRM
248
317
IRARGLPWQSSDQDIARFFKGLTIAKGGVALCLNAQGRRNGEALVRFINPEHRDLALERHKHHMGNRYIE
ENSTRUP00000019775
RRM
349
421
IRMRGLPFTATPQEVLSFIGPESPVTDGAEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKQILGKRYIE
ENSTRUP00000019775
RRM
473
545
VRLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQLKSPDKAFLVAQKCHKKTMKDRYVE
ENSTRUP00000019775
RRM
687
727
VRMQGLPYNTGVKDILSFFQGYQYGPEEYSSLVQMSEQARS
Links
Other
RRM
family RBPs
Other
Takifugu rubripes
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
esrp2
Danio rerio
ENSDARG00000018814
I
0.868
ESRP2
Gasterosteus aculeatus
ENSGACG00000016359
N
0.934
ESRP2
Oryzias latipes
ENSORLG00000011955
N
0.937
ESRP2
Tetraodon nigroviridis
ENSTNIG00000011350
N
0.965