GA21622-RA (Drosophila pseudoobscura)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0081607 T43183_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
sm
M067_0.6 		Drosophila melanogaster ABACACV RNAcompete
Ray et al.(2013)
RNCMPT00069 		0.816
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0276217 RRM 1 27
FBpp0276217 RRM 137 199
FBpp0276217 RRM 261 327

Links

Other RRM family RBPs
Other Drosophila pseudoobscura RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GE13838 Drosophila yakuba FBgn0231486 I 0.816
GH22768 Drosophila grimshawi FBgn0130225 I 0.811
GI18546 Drosophila mojavensis FBgn0141285 I 0.811
GJ21415 Drosophila virilis FBgn0208541 I 0.811
GK15699 Drosophila willistoni FBgn0217702 I 0.821
sm Drosophila melanogaster FBgn0003435 D 0.816