B9HTP6_POPTR (Populus trichocarpa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 POPTR_0010s06090 T45591_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0010s06090.1 RRM 82 148
POPTR_0010s06090.1 RRM 198 263
POPTR_0010s06090.1 RRM 387 433

Links

Other RRM family RBPs
Other Populus trichocarpa RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29929.m004782 Ricinus communis 29929.m004782 N 0.834
B9HLD5_POPTR Populus trichocarpa POPTR_0008s18340 N 0.900
cassava35775.valid.m1 Manihot esculenta cassava35775.valid.m1 N 0.790
Cucsa.075260 Cucumis sativus Cucsa.075260 N 0.708
MDP0000946445 Malus x domestica MDP0000946445 N 0.734
PK27686.1 Cannabis sativa PK27686.1 N 0.727
ppa023941m Prunus persica ppa023941m N 0.761