estExt_Genewise1.C_21367 (Trichoderma virens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1.C_21367 T51224_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_21367 RRM 16 83

Links

Other RRM family RBPs
Other Trichoderma virens RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB09506.1 Alternaria brassicicola AB09506.1 N 0.775
ACLA_068370 Aspergillus clavatus CADACLAG00006893 N 0.897
AFLA_130110 Aspergillus flavus CADAFLAG00010069 N 0.897
An02g14330 Aspergillus niger CADANGAG00002959 N 0.897
ANIA_07456 Aspergillus nidulans CADANIAG00000549 N 0.897
AO090001000713 Aspergillus oryzae CADAORAG00000650 N 0.897
ATEG_06786 Aspergillus terreus CADATEAG00009636 N 0.897
BC1G_07253 Botrytis cinerea BC1G_07253 N 0.912
BDBG_05422 Blastomyces dermatitidis BDBG_05422 N 0.926
CHGG_01436 Chaetomium globosum CHGG_01436 N 0.956
CIMG_00993 Coccidioides immitis CIMG_00993 N 0.897
CPSG_02222 Coccidioides posadasii CPSG_02222 N 0.897
estExt_fgenesh1_pg.C_20441 Myceliophthora thermophila estExt_fgenesh1_pg.C_20441 N 0.941
estExt_fgenesh1_pm.C_320007 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_320007 N 0.897
estExt_fgenesh2_kg.C_270002 Neurospora tetrasperma estExt_fgenesh2_kg.C_270002 N 0.956
estExt_fgenesh2_kg.C_40138 Thielavia terrestris estExt_fgenesh2_kg.C_40138 N 0.956
estExt_fgenesh2_pg.C_40112 Neurospora discreta estExt_fgenesh2_pg.C_40112 N 0.956
estExt_Genewise1.C_10238 Trichoderma reesei estExt_Genewise1.C_10238 N 0.971
estExt_Genewise1.C_50824 Cryphonectria parasitica estExt_Genewise1.C_50824 N 0.926
estExt_Genewise1Plus.C_100598 Trichoderma atroviride estExt_Genewise1Plus.C_100598 N 0.985
estExt_Genewise1Plus.C_14054 Mycosphaerella fijiensis estExt_Genewise1Plus.C_14054 N 0.941
estExt_Genewise1Plus.C_chr_60999 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_60999 N 0.912
fgenesh1_pg.sca_1_chr1_3_0000477 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000477 N 0.985
fgenesh1_pm.00082_#_90 Aspergillus carbonarius fgenesh1_pm.00082_#_90 N 0.897
FGSG_00536 Fusarium graminearum FGSG_00536 N 0.971
FOXG_00520 Fusarium oxysporum FOXG_00520 N 0.971
FVEG_00993 Fusarium verticillioides FVEG_00993 N 0.971
GLRG_04563 Colletotrichum graminicola GLRG_04563 N 0.956
GSTUMT00006858001 Tuber melanosporum GSTUMT00006858001 N 0.789
HCAG_03657 Histoplasma capsulatum HCAG_03657 N 0.926
MCYG_04660 Microsporum canis MCYG_04660 N 0.926
MGG_01579 Magnaporthe oryzae MGG_01579 N 0.985
MGYG_02003 Microsporum gypseum MGYG_02003 N 0.926
NCU02837 Neurospora crassa NCU02837 N 0.956
NFIA_082680 Neosartorya fischeri CADNFIAG00008521 N 0.897
PABG_01240 Paracoccidioides brasiliensis PABG_01240 N 0.926
Pa_1_8040 Podospora anserina Pa_1_8040 N 0.956
Pc22g08360 Penicillium chrysogenum Pc22g08360 N 0.882
PMAA_028810 Penicillium marneffei PMAA_028810 N 0.941
PTRG_02020 Pyrenophora tritici repentis PTRG_02020 N 0.912
SS1G_09992 Sclerotinia sclerotiorum SS1G_09992 N 0.912
TEQG_02446 Trichophyton equinum TEQG_02446 N 0.926
TERG_03272 Trichophyton rubrum TERG_03272 N 0.926
TESG_02801 Trichophyton tonsurans TESG_02801 N 0.926
UREG_00940 Uncinocarpus reesii UREG_00940 N 0.912
VDAG_03069 Verticillium dahliae VDAG_03069 N 0.985
VDBG_05905 Verticillium albo atrum VDBG_05905 N 0.882