gw1.2.1561.1 (Trichoplax adhaerens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.2.1561.1 T53171_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF2
M352_0.6 		Homo sapiens AGSAGAGUA SELEX
Cook et al.(2011)
953_7543047 		0.704
SRSF2
M332_0.6 		Homo sapiens UGUUCSAGWU SELEX
Cook et al.(2011)
791_10094314 		0.704
SRSF2
M274_0.6 		Homo sapiens GUUCGAGUA SELEX
Cook et al.(2011)
244_7543047 		0.704
SRSF2
M070_0.6 		Homo sapiens GGAGWD RNAcompete
Ray et al.(2013)
RNCMPT00072 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.2.1561.1 RRM 9 78

Links

Other RRM family RBPs
Other Trichoplax adhaerens RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCING00000004198 Ciona intestinalis ENSCING00000004198 I 0.704
ENSCSAVG00000009199 Ciona savignyi ENSCSAVG00000009199 I 0.704
ENSPPYG00000008668 Pongo pygmaeus ENSPPYG00000008668 I 0.704
LOC100409845 Callithrix jacchus ENSCJAG00000013412 I 0.704
LOC707883 Macaca mulatta ENSMMUG00000022413 I 0.704
Sfrs2 Rattus norvegicus ENSRNOG00000000248 I 0.704
SFRS2_BOVIN Bos taurus ENSBTAG00000018258 I 0.704
SFRS2_PANTR Pan troglodytes ENSPTRG00000009692 I 0.704
SRSF2 Monodelphis domestica ENSMODG00000001575 I 0.704
Srsf2 Mus musculus ENSMUSG00000034120 I 0.704
SRSF2 Ornithorhynchus anatinus ENSOANG00000002695 I 0.704
SRSF2 Pteropus vampyrus ENSPVAG00000014264 I 0.704
SRSF2 Tupaia belangeri ENSTBEG00000014339 I 0.704
SRSF2 Anolis carolinensis ENSACAG00000008553 I 0.704
SRSF2 Myotis lucifugus ENSMLUG00000009759 I 0.704
SRSF2 Microcebus murinus ENSMICG00000016956 I 0.704
SRSF2 Macropus eugenii ENSMEUG00000016745 I 0.704
SRSF2 Gorilla gorilla ENSGGOG00000014378 I 0.704
SRSF2 Homo sapiens ENSG00000161547 D 0.704
Srsf2 Dipodomys ordii ENSDORG00000014460 I 0.704
SRSF2 Dasypus novemcinctus ENSDNOG00000000439 I 0.704
SRSF2 Canis familiaris ENSCAFG00000005147 I 0.704
SRSF2 Taeniopygia guttata ENSTGUG00000007799 I 0.704