CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PDK_20s1346002g005
(
Phoenix dactylifera
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PDK_20s1346002g005
T58082_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1346002g005
RRM
5
71
VKVSNVSLGASEQDIEEFFSFSGNIEYVEMRSGDERTQVAYVTFKEPQGAETALLLSGATIVDMSVI
Links
Other
RRM
family RBPs
Other
Phoenix dactylifera
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
e_gw1.264.5.1
Capitella teleta
e_gw1.264.5.1
N
0.000
e_gw1.41.174.1
Lottia gigantea
e_gw1.41.174.1
N
0.000
gw1.25.255.1
Daphnia pulex
gw1.25.255.1
N
0.000