fgenesh1_pm.C_scaffold_10000060 (Batrachochytrium dendrobatidis)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 fgenesh1_pm.C_scaffold_10000060 T61223_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.844
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_10000060 S1 6 81

Links

Other S1 family RBPs
Other Batrachochytrium dendrobatidis RBPs

268 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G35535 Arabidopsis thaliana AT1G35535-TAIR-G N 0.000
AT1G47360 Arabidopsis thaliana AT1G47360-TAIR-G N 0.000
AT1G48680 Arabidopsis thaliana AT1G48680-TAIR-G N 0.000
AT2G03100 Arabidopsis thaliana AT2G03100-TAIR-G N 0.000
AT2G09830 Arabidopsis thaliana AT2G09830-TAIR-G N 0.000
AT2G13930 Arabidopsis thaliana AT2G13930-TAIR-G N 0.000
AT2G19840 Arabidopsis thaliana AT2G19840-TAIR-G N 0.000
AT3G27327 Arabidopsis thaliana AT3G27327-TAIR-G N 0.000
AT3G43444 Arabidopsis thaliana AT3G43444-TAIR-G N 0.000
AT4G05073 Arabidopsis thaliana AT4G05073-TAIR-G N 0.000
AT4G05133 Arabidopsis thaliana AT4G05133-TAIR-G N 0.000
AT4G09425 Arabidopsis thaliana AT4G09425-TAIR-G N 0.000
AT4G09595 Arabidopsis thaliana AT4G09595-TAIR-G N 0.000
AT5G28675 Arabidopsis thaliana AT5G28675-TAIR-G N 0.000
AT5G35820 Arabidopsis thaliana AT5G35820-TAIR-G N 0.000
AT5G57126 Arabidopsis thaliana AT5G57126-TAIR-G N 0.000