CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YTHDF1
(
Bos taurus
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSBTAG00000010383
T61968_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000013703
YTH
436
526
LLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNSQLRHIRLENNDNKPVTNSRDTQEVPLEKARQVLRIIASY
Links
Other
YTH
family RBPs
Other
Bos taurus
RBPs
158 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBG13969
Caenorhabditis briggsae
CBG13969
N
0.000
CBN20987
Caenorhabditis brenneri
CBN20987
N
0.000
CJA13807
Caenorhabditis japonica
CJA13807
N
0.000
Y55F3AM.3
Caenorhabditis elegans
Y55F3AM.3
N
0.000