CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UNKL
(
Tursiops truncatus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSTTRG00000011985
T03592_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000011367
CCCH ZF
186
203
ARGHCVKNGLHCAFAHGP
ENSTTRP00000011367
CCCH ZF
446
472
YKSTKCNDMLQTGHCPRGPFCAFAHVE
Links
Other
CCCH ZF
family RBPs
Other
Tursiops truncatus
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBN09099
Caenorhabditis brenneri
CBN09099
N
0.000
CBG13075
Caenorhabditis briggsae
CBG13075
N
0.000
fust-1
Caenorhabditis elegans
C27H5.3
N
0.000
CRE26445
Caenorhabditis remanei
CRE26445
N
0.000