CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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estExt_fgenesh2_pg.C_80267
(
Neurospora discreta
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
estExt_fgenesh2_pg.C_80267
T05065_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_80267
CCCH ZF
1
24
MTICKFYQQGTCRYGNNCRFEHPP
Links
Other
CCCH ZF
family RBPs
Other
Neurospora discreta
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ATEG_05700
Aspergillus terreus
CADATEAG00003388
N
0.792
CHGG_02340
Chaetomium globosum
CHGG_02340
N
0.750
GLRG_05485
Colletotrichum graminicola
GLRG_05485
N
0.750
NCU06894
Neurospora crassa
NCU06894
N
1.000
estExt_fgenesh2_pg.C_70123
Thielavia terrestris
estExt_fgenesh2_pg.C_70123
N
0.792