AT1G36800 (Arabidopsis thaliana)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 AT1G36800-TAIR-G T09306_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT1G36800.1-P CCHC ZF 220 237

Links

Other CCHC ZF family RBPs
Other Arabidopsis thaliana RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G42360 Arabidopsis thaliana AT3G42360-TAIR-G N 0.889
rbbp6l Danio rerio ENSDARG00000037919 N 0.722
genemark.2333_g Pleurotus ostreatus genemark.2333_g N 0.722
ENSTRUG00000009471 Takifugu rubripes ENSTRUG00000009471 N 0.722
ENSTNIG00000005451 Tetraodon nigroviridis ENSTNIG00000005451 N 0.722