LOC_Os04g25040 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os04g25040 T11278_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g25040.1 CCHC ZF 646 663

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

599 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G35535 Arabidopsis thaliana AT1G35535-TAIR-G N 0.000
AT5G28675 Arabidopsis thaliana AT5G28675-TAIR-G N 0.000
AT4G09595 Arabidopsis thaliana AT4G09595-TAIR-G N 0.000
AT4G09425 Arabidopsis thaliana AT4G09425-TAIR-G N 0.000
AT4G05133 Arabidopsis thaliana AT4G05133-TAIR-G N 0.000
AT4G05073 Arabidopsis thaliana AT4G05073-TAIR-G N 0.000
AT3G43444 Arabidopsis thaliana AT3G43444-TAIR-G N 0.000
AT3G27327 Arabidopsis thaliana AT3G27327-TAIR-G N 0.000
AT2G21310 Arabidopsis thaliana AT2G21310-TAIR-G N 0.000
AT2G19840 Arabidopsis thaliana AT2G19840-TAIR-G N 0.000
AT2G13930 Arabidopsis thaliana AT2G13930-TAIR-G N 0.000
AT2G09830 Arabidopsis thaliana AT2G09830-TAIR-G N 0.000
AT2G06930 Arabidopsis thaliana AT2G06930-TAIR-G N 0.000
AT2G03100 Arabidopsis thaliana AT2G03100-TAIR-G N 0.000
AT1G48680 Arabidopsis thaliana AT1G48680-TAIR-G N 0.000
AT1G47360 Arabidopsis thaliana AT1G47360-TAIR-G N 0.000
AT5G57126 Arabidopsis thaliana AT5G57126-TAIR-G N 0.000