LOC_Os07g16850 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os07g16850 T11772_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os07g16850.1 CCHC ZF 688 705

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

599 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.000
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.000
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.000
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.000
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.000
estExt_Genewise1Plus.C_150169 Daphnia pulex estExt_Genewise1Plus.C_150169 I 0.000
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.000
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.000
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.000
Q5ZKT4_CHICK Gallus gallus ENSGALG00000009484 I 0.000
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.000
ENSGACG00000011761 Gasterosteus aculeatus ENSGACG00000011761 I 0.000
SRSF4 Homo sapiens ENSG00000116350 I 0.000
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.000
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.000
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.000
ENSMGAG00000011888 Meleagris gallopavo ENSMGAG00000011888 I 0.000
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.000
Srsf4 Mus musculus ENSMUSG00000028911 I 0.000
SRSF4 Ochotona princeps ENSOPRG00000010098 I 0.000
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.000
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.000
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.000
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.000
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.000
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.000
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.000
XP_001180940.1 Strongylocentrotus purpuratus XP_001180940.1 I 0.000
XP_798746.1 Strongylocentrotus purpuratus XP_798746.1 I 0.000
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.000
XP_002200515.1 Taeniopygia guttata ENSTGUG00000011492 I 0.000
PACS2 Takifugu rubripes ENSTRUG00000010740 I 0.000
SRSF4 Takifugu rubripes ENSTRUG00000011891 I 0.000
SRSF4 Tarsius syrichta ENSTSYG00000007903 I 0.000
SRSF4 Tetraodon nigroviridis ENSTNIG00000005573 I 0.000
SRSF4 Tetraodon nigroviridis ENSTNIG00000000115 I 0.000
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.000