LOC_Os12g19770 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os12g19770 T12541_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os12g19770.1 CCHC ZF 427 444

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI1G10760 Brachypodium distachyon BRADI1G10760 N 0.000
BRADI1G51740 Brachypodium distachyon BRADI1G51740 N 0.000
BRADI5G20150 Brachypodium distachyon BRADI5G20150 N 0.000
PK05006.1 Cannabis sativa PK05006.1 N 0.000
PK28591.1 Cannabis sativa PK28591.1 N 0.000
Cucsa.322000 Cucumis sativus Cucsa.322000 N 0.000
Glyma01g01950.1 Glycine max Glyma01g01950.1 N 0.000
Glyma09g33960.1 Glycine max Glyma09g33960.1 N 0.000
MDP0000320634 Malus x domestica MDP0000320634 N 0.000
cassava25245.valid.m1 Manihot esculenta cassava25245.valid.m1 N 0.000
cassava25244.valid.m1 Manihot esculenta cassava25244.valid.m1 N 0.000
BGIOSIBCE012743 Oryza indica BGIOSIBCE012743 N 0.000
BGIOSIBCE020376 Oryza indica BGIOSIBCE020376 N 0.000
LOC_Os03g50560 Oryza sativa LOC_Os03g50560 N 0.000
LOC_Os06g02240 Oryza sativa LOC_Os06g02240 N 0.000
PDK_20s1373891g001 Phoenix dactylifera PDK_20s1373891g001 N 0.000
PDK_20s1613681g001 Phoenix dactylifera PDK_20s1613681g001 N 0.000
B9GZI4_POPTR Populus trichocarpa POPTR_0003s09410 N 0.000
A9PE83_POPTR Populus trichocarpa POPTR_0001s02090 N 0.000
ppa021083m Prunus persica ppa021083m N 0.000
SB01G010170 Sorghum bicolor Sb01g010170 N 0.000
SB10G000940 Sorghum bicolor Sb10g000940 N 0.000
GSVIVG00024381001 Vitis vinifera GSVIVG00024381001 N 0.000
GRMZM2G035719 Zea mays GRMZM2G035719 N 0.000
GRMZM2G102808 Zea mays GRMZM2G102808 N 0.000
GRMZM2G114789 Zea mays GRMZM2G114789 N 0.000