LOC_Os12g24920 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os12g24920 T12567_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os12g24920.1 CCHC ZF 305 322

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
POPTR_0008s18830 Populus trichocarpa POPTR_0008s18830 N 0.000
B9HEP3_POPTR Populus trichocarpa POPTR_0535s00210 N 0.000
B9NC13_POPTR Populus trichocarpa POPTR_0145s00200 N 0.000
B9IQN6_POPTR Populus trichocarpa POPTR_0019s11840 N 0.000
B9ILC9_POPTR Populus trichocarpa POPTR_0018s03300 N 0.000
POPTR_0013s10760 Populus trichocarpa POPTR_0013s10760 N 0.000
POPTR_0012s01930 Populus trichocarpa POPTR_0012s01930 N 0.000
POPTR_0010s01510 Populus trichocarpa POPTR_0010s01510 N 0.000
ppa015308m Prunus persica ppa015308m N 0.000
ppa016339m Prunus persica ppa016339m N 0.000
ppa017790m Prunus persica ppa017790m N 0.000
ppa021778m Prunus persica ppa021778m N 0.000
ppa023598m Prunus persica ppa023598m N 0.000
ppa026856m Prunus persica ppa026856m N 0.000