fgenesh1_pg.C_scaffold_189000020 (Daphnia pulex)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.C_scaffold_189000020 T13806_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_189000020 CCHC ZF 407 424

Links

Other CCHC ZF family RBPs
Other Daphnia pulex RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017769 Ailuropoda melanoleuca Ame_R017769 N 0.000
ENSCAFG00000005100 Canis familiaris ENSCAFG00000005100 N 0.000
RBM33 Choloepus hoffmanni ENSCHOG00000004031 N 0.000
ENSDARG00000074784 Danio rerio ENSDARG00000074784 N 0.000
RBM33 Felis catus ENSFCAG00000006602 N 0.000
RBM33 Gasterosteus aculeatus ENSGACG00000003891 N 0.000
RBM33 Loxodonta africana ENSLAFG00000015795 N 0.000
RBM33 Macropus eugenii ENSMEUG00000010548 N 0.000
ENSMODG00000005006 Monodelphis domestica ENSMODG00000005006 N 0.000
RBM33 Oryzias latipes ENSORLG00000010456 N 0.000
RBM33 Procavia capensis ENSPCAG00000006296 N 0.000
RBM33 Taeniopygia guttata ENSTGUG00000000696 N 0.000
RBM33 Takifugu rubripes ENSTRUG00000017878 N 0.000