SAKL0C03300g (Lachancea kluyveri)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 SAKL0C03300g T16309_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SAKL0C03300g CCHC ZF 44 60
SAKL0C03300g CCHC ZF 63 80
SAKL0C03300g CCHC ZF 87 103
SAKL0C03300g CCHC ZF 105 122
SAKL0C03300g CCHC ZF 138 155
SAKL0C03300g CCHC ZF 158 175
SAKL0C03300g CCHC ZF 180 197

Links

Other CCHC ZF family RBPs
Other Lachancea kluyveri RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFR646W Ashbya gossypii AFR646W N 0.800
CAGL0J07898g Candida glabrata CAGL0J07898g N 0.784
KLTH0F02904g Kluyveromyces thermotolerans KLTH0F02904g N 0.825
Kwal_13509 Kluyveromyces waltii Kwal_13509 N 0.810
19792_YNL255C Saccharomyces bayanus 19792_YNL255C N 0.722
Scas_Contig706.26 Saccharomyces castellii Scas_Contig706.26 N 0.738
GIS2 Saccharomyces cerevisiae YNL255C N 0.714
17968_YNL255C Saccharomyces mikatae 17968_YNL255C N 0.720
18392_YNL255C Saccharomyces paradoxus 18392_YNL255C N 0.706
A7TF51_VANPO Vanderwaltozyma polyspora A7TF51_VANPO N 0.770
ZYRO0F16148g Zygosaccharomyces rouxii ZYRO0F16148g N 0.810