CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CBN20898
(
Caenorhabditis brenneri
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
CBN20898
T16728_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN20898
CSD
61
132
GLQGKVKWYSVLRRYGFISRNDGEKDVFVHQTAIAKSDTEKFYLRTLGDEEEVLFDLVEGKNGPEAANVTGP
Links
Other
CSD
family RBPs
Other
Caenorhabditis brenneri
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
amel4_ncbi_hmm4691
Apis mellifera
amel4_ncbi_hmm4691
N
0.000
GF11371
Drosophila ananassae
FBgn0088411
N
0.000
GG22940
Drosophila erecta
FBgn0115097
N
0.000
snama
Drosophila melanogaster
FBgn0086129
N
0.000
GL11666
Drosophila persimilis
FBgn0149275
N
0.000
GA16823-RA
Drosophila pseudoobscura
FBgn0076837
N
0.000
GM18306
Drosophila sechellia
FBgn0173213
N
0.000
GK21919
Drosophila willistoni
FBgn0223904
N
0.000
nasonia_NCBI_hmm348274
Nasonia vitripennis
nasonia_NCBI_hmm348274
N
0.000