CSDE1 (Oryzias latipes)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSORLG00000000707 T16962_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000000878 CSD 80 145
ENSORLP00000000878 CSD 209 272
ENSORLP00000000878 CSD 373 438
ENSORLP00000000878 CSD 476 534
ENSORLP00000000878 CSD 543 607
ENSORLP00000000878 CSD 663 698
ENSORLP00000000878 CSD 698 763

Links

Other CSD family RBPs
Other Oryzias latipes RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CSDE1 Canis familiaris ENSCAFG00000009618 N 0.700
CSDE1 Macropus eugenii ENSMEUG00000002677 N 0.710
Csde1 Mus musculus ENSMUSG00000068823 N 0.700
CSDE1 Procavia capensis ENSPCAG00000014368 N 0.702
CSDE1 Sus scrofa ENSSSCG00000006752 N 0.702
CSDE1 Tarsius syrichta ENSTSYG00000003747 N 0.700