CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSRNOG00000038693
(
Rattus norvegicus
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
ENSRNOG00000038693
T17005_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000055850
CSD
22
78
KERIFINRNYTKEDVFVQQTAIKKNNPRKYLCRVGDGETEFGVEGEKGADAANDTGP
Links
Other
CSD
family RBPs
Other
Rattus norvegicus
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CSDA
Gorilla gorilla
ENSGGOG00000001352
I
0.700