CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TcIL3000.0.46480
(
Trypanosoma congolense
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
TcIL3000.0.46480
T17201_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TcIL3000.0.46480
CSD
206
230
WYEGFVKRYNPTRGFGFLTATHHLQ
TcIL3000.0.46480
CSD
262
314
IMKTPVSVGDVFVHQSYIRMEGFRALTAGDVVAFRVGKLSGKDAKQAVSVQVL
Links
Other
CSD
family RBPs
Other
Trypanosoma congolense
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh1_pm.C_scaffold_6000341
Pleurotus ostreatus
fgenesh1_pm.C_scaffold_6000341
N
0.000
fgenesh2_kg.11_#_49_#_6001_1_CFPN
Serpula lacrymans
fgenesh2_kg.11_#_49_#_6001_1_CFPN
N
0.000