CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CpipJ_CPIJ014320
(
Culex pipiens
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CpipJ_CPIJ014320
T17609_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ014320-RA
KH
49
118
VRVQVPVRDHPKFNFVGKLLGPKGNSLKRLQEETMCKMAVLGKGSMRDRKKEEELRLSGDPRYAHLSEDL
Links
Other
KH
family RBPs
Other
Culex pipiens
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC_Os01g21536
Oryza sativa
LOC_Os01g21536
N
0.000
LOC_Os09g02990
Oryza sativa
LOC_Os09g02990
N
0.000
LOC_Os09g03440
Oryza sativa
LOC_Os09g03440
N
0.000
LOC_Os11g14610
Oryza sativa
LOC_Os11g14610
N
0.000
LOC_Os11g14650
Oryza sativa
LOC_Os11g14650
N
0.000
LOC_Os11g15690
Oryza sativa
LOC_Os11g15690
N
0.000
LOC_Os11g19430
Oryza sativa
LOC_Os11g19430
N
0.000
LOC_Os11g21870
Oryza sativa
LOC_Os11g21870
N
0.000
LOC_Os11g22540
Oryza sativa
LOC_Os11g22540
N
0.000
LOC_Os12g19620
Oryza sativa
LOC_Os12g19620
N
0.000
LOC_Os12g22380
Oryza sativa
LOC_Os12g22380
N
0.000
LOC_Os12g34650
Oryza sativa
LOC_Os12g34650
N
0.000
LOC_Os08g24220
Oryza sativa
LOC_Os08g24220
N
0.000
LOC_Os08g17890
Oryza sativa
LOC_Os08g17890
N
0.000
LOC_Os07g28200
Oryza sativa
LOC_Os07g28200
N
0.000
LOC_Os01g35070
Oryza sativa
LOC_Os01g35070
N
0.000
LOC_Os02g18340
Oryza sativa
LOC_Os02g18340
N
0.000
LOC_Os02g25180
Oryza sativa
LOC_Os02g25180
N
0.000
LOC_Os03g39450
Oryza sativa
LOC_Os03g39450
N
0.000
LOC_Os03g45550
Oryza sativa
LOC_Os03g45550
N
0.000
LOC_Os04g03190
Oryza sativa
LOC_Os04g03190
N
0.000
LOC_Os04g18900
Oryza sativa
LOC_Os04g18900
N
0.000
LOC_Os04g29330
Oryza sativa
LOC_Os04g29330
N
0.000
LOC_Os04g56890
Oryza sativa
LOC_Os04g56890
N
0.000
LOC_Os05g18480
Oryza sativa
LOC_Os05g18480
N
0.000
LOC_Os06g35220
Oryza sativa
LOC_Os06g35220
N
0.000
LOC_Os12g43050
Oryza sativa
LOC_Os12g43050
N
0.000