CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DGIL_AUG5s14032g4t1
(
Acyrtosiphon pisum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
DGIL_AUG5s14032g4t1
T18008_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DGIL_AUG5s14032g4t1
KH
55
141
SIRVAVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTITKMAILGRGSMRDRNKEEKLRNSGDPKFSHLKDDLHVEITAFAPPAEAHAR
Links
Other
KH
family RBPs
Other
Acyrtosiphon pisum
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PK08637.1
Cannabis sativa
PK08637.1
N
0.000
Cucsa.240830
Cucumis sativus
Cucsa.240830
N
0.000
Glyma07g14870.1
Glycine max
Glyma07g14870.1
N
0.000
Glyma04g06080.1
Glycine max
Glyma04g06080.1
N
0.000
Glyma03g00470.1
Glycine max
Glyma03g00470.1
N
0.000
chr1.CM0133.940.nd
Lotus japonicus
chr1.CM0133.940.nd
N
0.000
cassava8073.valid.m1
Manihot esculenta
cassava8073.valid.m1
N
0.000
cassava8072.valid.m1
Manihot esculenta
cassava8072.valid.m1
N
0.000
cassava18372.valid.m1
Manihot esculenta
cassava18372.valid.m1
N
0.000
cassava18371.valid.m1
Manihot esculenta
cassava18371.valid.m1
N
0.000
BGIOSIBCE033128
Oryza indica
BGIOSIBCE033128
N
0.000
LOC_Os10g41960
Oryza sativa
LOC_Os10g41960
N
0.000
PDK_20s1307762g001
Phoenix dactylifera
PDK_20s1307762g001
N
0.000
POPTR_0018s02940
Populus trichocarpa
POPTR_0018s02940
N
0.000
B9HB90_POPTR
Populus trichocarpa
POPTR_0006s28330
N
0.000
29848.m004501
Ricinus communis
29848.m004501
N
0.000
GSVIVG00036012001
Vitis vinifera
GSVIVG00036012001
N
0.000