CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
Pc12g11760
(
Penicillium chrysogenum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Pc12g11760
T21913_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc12g11760.t1
KH
272
346
VDAIKLDSTMHTLVCGRTRKNIKLIEAATGTAIYFPPPFPQIFGYIPPGANRRSEDEVYITGETPEQIARAKQKL
Pc12g11760.t1
KH
451
488
RSMLSDICTNSEAEVSFDNLTFTINGSDDAVKAAMTVI
Pc12g11760.t1
KH
502
563
RVKIELANEHKEFVSGKKNGKINKIMGQSNVQIIFDGFNEYNFYIDVCGNQYESTKNGLDLV
Pc12g11760.t1
KH
570
640
SISFHVPDQYHKRIIGIGGQHIQRIMKKYSVFVKFSNAMDRGGMGKEDDDIKVDNVICRTPARNAQSLDLV
Pc12g11760.t1
KH
659
716
RVVINRLYHRELLARMTEIDELEKKWNCKIEFPSTELASDVVTISGPEYQVPQAVDAL
Links
Other
KH
family RBPs
Other
Penicillium chrysogenum
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BRADI4G27050
Brachypodium distachyon
BRADI4G27050
N
0.000
LOC_Os09g10760
Oryza sativa
LOC_Os09g10760
N
0.000