CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSTRUG00000006949
(
Takifugu rubripes
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSTRUG00000006949
T26853_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000017059
RanBP ZF
197
223
GWSCPSCTYINKPTRPGCEICSTNRPE
ENSTRUP00000017060
RanBP ZF
183
211
AQGWSCPSCTYINKPTRPGCEICSTNRPE
ENSTRUP00000017061
RanBP ZF
184
210
GWSCPSCTYINKPTRPGCEICSTNRPE
ENSTRUP00000017062
RanBP ZF
173
199
GWSCPSCTYINKPTRPGCEICSTNRPE
ENSTRUP00000017063
RanBP ZF
359
384
GWSCPSCTYINKPTRPGCEICSTNRP
Links
Other
RanBP ZF
family RBPs
Other
Takifugu rubripes
RBPs
49 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Aqu1.201808
Amphimedon queenslandica
Aqu1.201808
N
0.000
Aqu1.214624
Amphimedon queenslandica
Aqu1.214624
N
0.000
fgenesh2_pg.scaffold_902000002
Branchiostoma floridae
fgenesh2_pg.scaffold_902000002
N
0.000
LOC_Os07g20810
Oryza sativa
LOC_Os07g20810
N
0.000
LOC_Os10g20570
Oryza sativa
LOC_Os10g20570
N
0.000