CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_04453
(
Trichophyton tonsurans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TESG_04453
T31173_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_04453T0
RRM
317
377
VYIRGFLPETTDEMLHNYASRFGKIDRCKAIIDLETGLCKGFGFVQFFSFDACENCIRGFF
TESG_04453T0
RRM
405
470
VYCTNVPIDWAEADLRRHFEPYQVVSEQISRDEKTGVSKEVGFARFETREIAEKVVQQFHNVVGKD
Links
Other
RRM
family RBPs
Other
Trichophyton tonsurans
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
e_gw1.00083.499.1
Aspergillus carbonarius
e_gw1.00083.499.1
N
0.703
ACLA_084710
Aspergillus clavatus
CADACLAG00007436
N
0.802
AFLA_109310
Aspergillus flavus
CADAFLAG00004665
N
0.802
AFUA_6G11030
Aspergillus fumigatus
CADAFUAG00001799
N
0.763
ANIA_00592
Aspergillus nidulans
CADANIAG00002082
N
0.846
ATEG_05061
Aspergillus terreus
CADATEAG00003794
N
0.725
BDBG_06539
Blastomyces dermatitidis
BDBG_06539
N
0.898
CIMG_10503
Coccidioides immitis
CIMG_10503
N
0.829
CPSG_04956
Coccidioides posadasii
CPSG_04956
N
0.829
HCAG_09223
Histoplasma capsulatum
HCAG_09223
N
0.898
MGYG_04890
Microsporum gypseum
MGYG_04890
N
0.969
NFIA_056760
Neosartorya fischeri
CADNFIAG00005317
N
0.776
Pc21g20920
Penicillium chrysogenum
Pc21g20920
N
0.752
PMAA_052620
Penicillium marneffei
PMAA_052620
N
0.785
TERG_01790
Trichophyton rubrum
TERG_01790
N
0.992