CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CRE26746
(
Caenorhabditis remanei
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CRE26746
T34464_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE26746
RRM
243
312
LLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQ
CRE26746
RRM
346
415
VLVENLHPKITENMIREIFESFGRIEKLEMEKLSNGDNRETAVIVFRNADEAQKSIEQLNNFELAGRQIR
CRE26746
RRM
514
573
DHDIREDVIEQCAQHGGALHVFVDKGSEQGNVYVKCPSIAIAHQAVSALHGRWFSGKVIT
Links
Other
RRM
family RBPs
Other
Caenorhabditis remanei
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBN20987
Caenorhabditis brenneri
CBN20987
N
0.885
CBG13969
Caenorhabditis briggsae
CBG13969
N
0.810
Y55F3AM.3
Caenorhabditis elegans
Y55F3AM.3
N
0.895
CJA13807
Caenorhabditis japonica
CJA13807
N
0.875