CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TNRC6B
(
Equus caballus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSECAG00000009759
T36601_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000008008
RRM
1628
1692
LVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTIL
Links
Other
RRM
family RBPs
Other
Equus caballus
RBPs
115 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CHGG_04608
Chaetomium globosum
CHGG_04608
N
0.000
fgenesh1_pm.1_#_454
Myceliophthora thermophila
fgenesh1_pm.1_#_454
N
0.000
NCU07699
Neurospora crassa
NCU07699
N
0.000
estExt_fgenesh1_pm.C_40197
Neurospora tetrasperma
estExt_fgenesh1_pm.C_40197
N
0.000