CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MKI67IP
(
Gasterosteus aculeatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGACG00000001551
T37389_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000002027
RRM
50
120
VYVAHLPHGLFEPQLKSYFEQFGKVLRVRLSRSKKTGGTKGYAFVEFDCDEVAKIVAETMNNYLMGERLIK
ENSGACP00000002030
RRM
50
120
VYVAHLPHGLFEPQLKSYFEQFGKVLRVRLSRSKKTGGTKGYAFVEFDCDEVAKIVAETMNNYLMGERLIK
ENSGACP00000002035
RRM
50
120
VYVAHLPHGLFEPQLKSYFEQFGKVLRVRLSRSKKTGGTKGYAFVEFDCDEVAKIVAETMNNYLMGERLIK
Links
Other
RRM
family RBPs
Other
Gasterosteus aculeatus
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_gwp.C_4020036
Branchiostoma floridae
estExt_gwp.C_4020036
N
0.704
estExt_fgenesh2_pg.C_7810009
Branchiostoma floridae
estExt_fgenesh2_pg.C_7810009
N
0.704
LOC100386303
Callithrix jacchus
ENSCJAG00000013386
N
0.718
MKI67IP
Choloepus hoffmanni
ENSCHOG00000002227
N
0.775
mki67ip
Danio rerio
ENSDARG00000040666
N
0.873
MKI67IP
Erinaceus europaeus
ENSEEUG00000008535
N
0.704
MKI67IP
Gallus gallus
ENSGALG00000011650
N
0.761
MKI67IP
Gorilla gorilla
ENSGGOG00000023498
N
0.704
MKI67IP
Homo sapiens
ENSG00000155438
N
0.704
MKI67IP
Loxodonta africana
ENSLAFG00000030731
N
0.775
MKI67IP
Macaca mulatta
ENSMMUG00000020928
N
0.704
MKI67IP
Meleagris gallopavo
ENSMGAG00000011953
N
0.775
XM_001364715.1
Monodelphis domestica
ENSMODG00000000152
N
0.718
MKI67IP
Oryzias latipes
ENSORLG00000018551
N
0.859
MKI67IP
Pan troglodytes
ENSPTRG00000012419
N
0.704
ENSPPYG00000025875
Pongo pygmaeus
ENSPPYG00000025875
N
0.718
MKI67IP
Takifugu rubripes
ENSTRUG00000005206
N
0.873
MKI67IP
Tetraodon nigroviridis
ENSTNIG00000017831
N
0.873
mki67ip
Xenopus tropicalis
ENSXETG00000000839
N
0.704