ENSGGOG00000022020 (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGGOG00000022020 T37900_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.814
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.814
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.814
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.800
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.736
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000018646 RRM 14 82
ENSGGOP00000018646 RRM 104 173

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

208 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.716
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.814
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.800
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.807
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.900
LOC785445 Bos taurus ENSBTAG00000025621 I 0.773
LOC781499 Bos taurus ENSBTAG00000021580 I 0.894
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.800
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.800
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.858
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.779
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.757
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.745
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.709
ENSCJAG00000006928 Callithrix jacchus ENSCJAG00000006928 I 0.814
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.738
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.732
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.702
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.779
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.793
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.738
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.730
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.730
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.714
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.743
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.771
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.779
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.894
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.730
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.800
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.800
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.702
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.752
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.752
ENSCAFG00000023240 Canis familiaris ENSCAFG00000023240 I 0.714
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.709
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.709
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.764
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.800
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.750
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.716
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.704
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.745
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.757
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.718
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.706
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.793
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.739
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.711
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.779
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.718
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.718
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.716
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.725
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.730
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.894
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.720
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.901
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.894
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.779
zgc:66127 Danio rerio ENSDARG00000011020 I 0.700
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.729
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.771
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.800
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.894
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.721
ENSDORG00000011155 Dipodomys ordii ENSDORG00000011155 I 0.801
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.730
LOC100066794 Equus caballus ENSECAG00000023237 I 0.900
LOC100054206 Equus caballus ENSECAG00000006699 I 0.725
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.800
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.702
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.786
ENSEEUG00000000925 Erinaceus europaeus ENSEEUG00000000925 I 0.709
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.764
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.900
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.800
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.893
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.725
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.764
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.813
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.723
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.709
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.786
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.894
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.800
HNRNPA1 Homo sapiens ENSG00000135486 D 0.800
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.786
HNRNPA3 Homo sapiens ENSG00000170144 I 0.894
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.800
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.807
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.771
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.809
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.786
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.793
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.779
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.800
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.807
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.779
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.745
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.752
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.894
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.894
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.893
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.787
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.704
HNRNPA3 Microcebus murinus ENSMICG00000005513 I 0.858
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.704
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.894
ENSMODG00000024570 Monodelphis domestica ENSMODG00000024570 I 0.709
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.800
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.779
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.894
Gm8991 Mus musculus ENSMUSG00000059179 I 0.900
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.894
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.786
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.800
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.739
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.793
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.793
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.800
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.793
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.786
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.771
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.745
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.793
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.786
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.779
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.800
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.793
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.887
ENSOCUG00000006431 Oryctolagus cuniculus ENSOCUG00000006431 I 0.707
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.739
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.764
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.779
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.800
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.800
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.800
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.820
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.894
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.800
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.771
ENSPPYG00000016683 Pongo pygmaeus ENSPPYG00000016683 I 0.806
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.844
ENSPPYG00000001326 Pongo pygmaeus ENSPPYG00000001326 I 0.743
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.865
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.721
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.894
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.800
ENSRNOG00000030250 Rattus norvegicus ENSRNOG00000030250 I 0.713
ENSRNOG00000030901 Rattus norvegicus ENSRNOG00000030901 I 0.821
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.871
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.761
ENSRNOG00000033211 Rattus norvegicus ENSRNOG00000033211 I 0.709
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.800
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.893
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.771
ENSRNOG00000042377 Rattus norvegicus ENSRNOG00000042377 I 0.715
D3ZB98_RAT Rattus norvegicus ENSRNOG00000029641 I 0.707
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.764
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.816
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.894
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.771
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.845
D4A8U2_RAT Rattus norvegicus ENSRNOG00000007252 I 0.716
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.738
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.837
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.716
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.757
ENSRNOG00000024652 Rattus norvegicus ENSRNOG00000024652 I 0.703
D3ZK54_RAT Rattus norvegicus ENSRNOG00000025482 I 0.703
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.759
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.894
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.864
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.721
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.723
ENSSSCG00000015989 Sus scrofa ENSSSCG00000015989 I 0.809
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.894
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.800
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.893
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.750
Q1KKS6_FUGRU Takifugu rubripes ENSTRUG00000017504 I 0.739
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.750
HNRNPA3 Tetraodon nigroviridis ENSTNIG00000016958 I 0.743
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.773
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.800
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.738
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.894
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.800
ENSTTRG00000015563 Tursiops truncatus ENSTTRG00000015563 I 0.708
P17130 Xenopus laevis P17130 I 0.743
P51968 Xenopus laevis P51968 I 0.857
CBU92546 Xenopus laevis CBU92546 I 0.757
CBU92451 Xenopus laevis CBU92451 I 0.845
CBU92428 Xenopus laevis CBU92428 I 0.743
CBF67672 Xenopus laevis CBF67672 I 0.757
CBF67578 Xenopus laevis CBF67578 I 0.845
CBF67555 Xenopus laevis CBF67555 I 0.743
AAI69881 Xenopus laevis AAI69881 I 0.845
AAH72090 Xenopus laevis AAH72090 I 0.757
AAH45260 Xenopus laevis AAH45260 I 0.757
AAA49950 Xenopus laevis AAA49950 I 0.845
AAA49949 Xenopus laevis AAA49949 I 0.857
AAA49742 Xenopus laevis AAA49742 I 0.743
AAA49741 Xenopus laevis AAA49741 I 0.743
P51992 Xenopus laevis P51992 I 0.845
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.764
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.864