HNRNPA3 (Loxodonta africana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSLAFG00000027712 T38121_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.801
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.801
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.801
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.787
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.716
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000020428 RRM 31 100
ENSLAFP00000020428 RRM 122 182
ENSLAFP00000022900 RRM 31 100
ENSLAFP00000022900 RRM 122 181
ENSLAFP00000023225 RRM 34 103
ENSLAFP00000023225 RRM 125 184

Links

Other RRM family RBPs
Other Loxodonta africana RBPs

206 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
C6orf52 Gasterosteus aculeatus ENSGACG00000014944 N 0.000
C6orf52 Oryzias latipes ENSORLG00000013265 N 0.000
C6orf52 Takifugu rubripes ENSTRUG00000008608 N 0.000
C6orf52 Tetraodon nigroviridis ENSTNIG00000000916 N 0.000