CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TNRC6C
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000003906
T38343_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000003698
RRM
1510
1574
LVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTIL
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
115 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
mgf021210m
Mimulus guttatus
mgf021210m
N
0.000
Genemark.10729_g
Serpula lacrymans
Genemark.10729_g
N
0.000
Genemark.4174_g
Serpula lacrymans
Genemark.4174_g
N
0.000
Genemark.8306_g
Serpula lacrymans
Genemark.8306_g
N
0.000
Sb04g021900
Sorghum bicolor
Sb04g021900
N
0.000