CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XR_012409.1
(
Macaca mulatta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMMUG00000022731
T39002_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000029938
RRM
46
115
VYVCHLPNLLNETQILSSSQCGTVTRFRLSRNKRPGNSKGHAFVEFESEDVAEIVAETMNNYLFGERLLE
ENSMMUP00000033420
RRM
48
117
VYVCHLPNLLNETQILSSSQCGTVTRFRLSRNKRPGNSKGHAFVEFESEDVAEIVAETMNNYLFGERLLE
Links
Other
RRM
family RBPs
Other
Macaca mulatta
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R009999
Ailuropoda melanoleuca
Ame_R009999
N
0.746
MKI67IP
Anolis carolinensis
ENSACAG00000004655
N
0.000
MK67I_BOVIN
Bos taurus
ENSBTAG00000019387
N
0.746
LOC100386303
Callithrix jacchus
ENSCJAG00000013386
N
0.831
MKI67IP
Canis familiaris
ENSCAFG00000004710
N
0.761
MKI67IP
Choloepus hoffmanni
ENSCHOG00000002227
N
0.718
mki67ip
Danio rerio
ENSDARG00000040666
N
0.000
LOC100055172
Equus caballus
ENSECAG00000018478
N
0.746
MKI67IP
Erinaceus europaeus
ENSEEUG00000008535
N
0.746
MKI67IP
Felis catus
ENSFCAG00000010787
N
0.761
MKI67IP
Gallus gallus
ENSGALG00000011650
N
0.000
MKI67IP
Gasterosteus aculeatus
ENSGACG00000001551
N
0.000
MKI67IP
Gorilla gorilla
ENSGGOG00000023498
N
0.859
ENSGGOG00000025506
Gorilla gorilla
ENSGGOG00000025506
N
0.817
MKI67IP
Homo sapiens
ENSG00000155438
N
0.859
MKI67IP
Loxodonta africana
ENSLAFG00000030731
N
0.704
MKI67IP
Macaca mulatta
ENSMMUG00000020928
N
0.873
MKI67IP
Meleagris gallopavo
ENSMGAG00000011953
N
0.000
MKI67IP
Microcebus murinus
ENSMICG00000015787
N
0.732
XM_001364715.1
Monodelphis domestica
ENSMODG00000000152
N
0.000
ENSMODG00000008447
Monodelphis domestica
ENSMODG00000008447
N
0.000
MKI67IP
Ornithorhynchus anatinus
ENSOANG00000007522
N
0.000
MKI67IP
Oryctolagus cuniculus
ENSOCUG00000007451
N
0.761
MKI67IP
Oryzias latipes
ENSORLG00000018551
N
0.000
MKI67IP
Otolemur garnettii
ENSOGAG00000016968
N
0.746
MKI67IP
Pan troglodytes
ENSPTRG00000012419
N
0.845
ENSPPYG00000025875
Pongo pygmaeus
ENSPPYG00000025875
N
0.859
ENSPPYG00000018557
Pongo pygmaeus
ENSPPYG00000018557
N
0.859
MKI67IP
Pteropus vampyrus
ENSPVAG00000016707
N
0.775
MKI67IP
Takifugu rubripes
ENSTRUG00000005206
N
0.000
MKI67IP
Tetraodon nigroviridis
ENSTNIG00000017831
N
0.000
MKI67IP
Tursiops truncatus
ENSTTRG00000005849
N
0.732
MKI67IP
Vicugna pacos
ENSVPAG00000005847
N
0.732
Q7SYS2
Xenopus laevis
Q7SYS2
N
0.000
mki67ip
Xenopus tropicalis
ENSXETG00000000839
N
0.000