CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMODG00000008447
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000008447
T39113_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000010502
RRM
37
107
VYLGHLPRGLYEPQLKEYFTQFGTVKRLMLSRSKKTRNSKGYGFLEFESDDVAKIVADRMNNYLFCERLLK
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R009999
Ailuropoda melanoleuca
Ame_R009999
N
0.704
MK67I_BOVIN
Bos taurus
ENSBTAG00000019387
N
0.732
MKI67IP
Canis familiaris
ENSCAFG00000004710
N
0.704
MKI67IP
Choloepus hoffmanni
ENSCHOG00000002227
N
0.803
mki67ip
Danio rerio
ENSDARG00000040666
N
0.718
LOC100055172
Equus caballus
ENSECAG00000018478
N
0.746
MKI67IP
Erinaceus europaeus
ENSEEUG00000008535
N
0.718
MKI67IP
Gallus gallus
ENSGALG00000011650
N
0.817
MKI67IP
Loxodonta africana
ENSLAFG00000030731
N
0.817
MKI67IP
Macaca mulatta
ENSMMUG00000020928
N
0.704
MKI67IP
Meleagris gallopavo
ENSMGAG00000011953
N
0.803
XM_001364715.1
Monodelphis domestica
ENSMODG00000000152
N
0.958
MKI67IP
Ornithorhynchus anatinus
ENSOANG00000007522
N
0.761
MKI67IP
Oryctolagus cuniculus
ENSOCUG00000007451
N
0.718
MKI67IP
Otolemur garnettii
ENSOGAG00000016968
N
0.704
ENSPPYG00000025875
Pongo pygmaeus
ENSPPYG00000025875
N
0.704
MKI67IP
Pteropus vampyrus
ENSPVAG00000016707
N
0.718
MKI67IP
Takifugu rubripes
ENSTRUG00000005206
N
0.732
MKI67IP
Tetraodon nigroviridis
ENSTNIG00000017831
N
0.732
MKI67IP
Tursiops truncatus
ENSTTRG00000005849
N
0.718
MKI67IP
Vicugna pacos
ENSVPAG00000005847
N
0.746
Q7SYS2
Xenopus laevis
Q7SYS2
N
0.746
mki67ip
Xenopus tropicalis
ENSXETG00000000839
N
0.789