CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP2
(
Tetraodon nigroviridis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTNIG00000011350
T42097_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000014294
RRM
227
296
IRARGLPWQSSDQDIARFFKGLSIARGGVALCLNAQGRRNGEALVRFINSEHRDLALERHKHHMGNRYIE
ENSTNIP00000014294
RRM
328
400
IRMRGLPFTATPQEVLSFLGPESPVTDGSEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKQILGKRYIE
ENSTNIP00000014294
RRM
452
524
VRLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQMKSPDKAFMVAQKCHKKTMKDRYVE
ENSTNIP00000014294
RRM
646
687
VRMQGLPYNTGVKDILSFFQGYQYGPEEYSSVVQMSEQARSL
Links
Other
RRM
family RBPs
Other
Tetraodon nigroviridis
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
esrp2
Danio rerio
ENSDARG00000018814
I
0.780
ESRP2
Gasterosteus aculeatus
ENSGACG00000016359
N
0.813
ESRP2
Oryzias latipes
ENSORLG00000011955
N
0.808
ESRP2
Takifugu rubripes
ENSTRUG00000007941
N
0.965